DMSC Integration Testing

notebook = PosixPath('/home/gitlab-runner/builds/sr_srNBdt/1/dmsc-nightly/dmsc-nightly/.tox/codeshelf-odin/.pytest_cache/codeshelf/repo/src/odin/notebooks/Bragg-edge-fitting.ipynb')
run_codeshelf_notebook = <function _run_codeshelf_notebook at 0x7ffb53e28220>
tmp_path = PosixPath('/tmp/pytest-of-gitlab-runner/pytest-348/test_run_notebooks_Bragg_edge_0')

    def test_run_notebooks(
        notebook: Path, run_codeshelf_notebook: Callable, tmp_path: Path
    ):
>       run_codeshelf_notebook(notebook_path=notebook, run_path=tmp_path)

tests/codeshelf/codeshelf_test.py:10: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
tests/codeshelf/conftest.py:138: in _run_codeshelf_notebook
    ep.preprocess(nb, {"metadata": {"path": run_path}})
.tox/codeshelf-odin/lib/python3.12/site-packages/nbconvert/preprocessors/execute.py:103: in preprocess
    self.preprocess_cell(cell, resources, index)
.tox/codeshelf-odin/lib/python3.12/site-packages/nbconvert/preprocessors/execute.py:124: in preprocess_cell
    cell = self.execute_cell(cell, index, store_history=True)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
.tox/codeshelf-odin/lib/python3.12/site-packages/jupyter_core/utils/__init__.py:165: in wrapped
    return loop.run_until_complete(inner)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/opt/miniforge/lib/python3.12/asyncio/base_events.py:687: in run_until_complete
    return future.result()
           ^^^^^^^^^^^^^^^
.tox/codeshelf-odin/lib/python3.12/site-packages/nbclient/client.py:1062: in async_execute_cell
    await self._check_raise_for_error(cell, cell_index, exec_reply)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = <nbconvert.preprocessors.execute.ExecutePreprocessor object at 0x7ffb53f26ba0>
cell = {'cell_type': 'code', 'execution_count': 1, 'id': '3', 'metadata': {'tags': ['remove-cell'], 'execution': {'iopub.stat...tch\n\nimport easyimaging.measurement.measurement\n\neasyimaging.measurement.measurement._is_notebook = lambda : True'}
cell_index = 3
exec_reply = {'header': {'msg_id': '73f4dcc5-fb6a7f44207e744dd657fc38_766532_15', 'msg_type': 'execute_reply', 'username': 'usernam...5_2', 'msg_type': 'execute_request', 'username': 'username', 'session': 'd7a83f1f-ca7a7d7066985ed7a58d1a18', ...}, ...}

    async def _check_raise_for_error(
        self, cell: NotebookNode, cell_index: int, exec_reply: dict[str, t.Any] | None
    ) -> None:
        if exec_reply is None:
            return None
    
        exec_reply_content = exec_reply["content"]
        if exec_reply_content["status"] != "error":
            return None
    
        cell_allows_errors = (not self.force_raise_errors) and (
            self.allow_errors
            or exec_reply_content.get("ename") in self.allow_error_names
            or "raises-exception" in cell.metadata.get("tags", [])
        )
        await run_hook(
            self.on_cell_error, cell=cell, cell_index=cell_index, execute_reply=exec_reply
        )
        if not cell_allows_errors:
>           raise CellExecutionError.from_cell_and_msg(cell, exec_reply_content)
E           nbclient.exceptions.CellExecutionError: An error occurred while executing the following cell:
E           ------------------
E           from unittest.mock import patch
E           
E           import easyimaging.measurement.measurement
E           
E           easyimaging.measurement.measurement._is_notebook = lambda : True
E           ------------------
E           
E           
E           #x1B[31m---------------------------------------------------------------------------#x1B[39m
E           #x1B[31mModuleNotFoundError#x1B[39m                       Traceback (most recent call last)
E           #x1B[36mCell#x1B[39m#x1B[36m #x1B[39m#x1B[32mIn[1]#x1B[39m#x1B[32m, line 3#x1B[39m
E           #x1B[32m      1#x1B[39m #x1B[38;5;28;01mfrom#x1B[39;00m unittest.mock #x1B[38;5;28;01mimport#x1B[39;00m patch
E           #x1B[32m      2#x1B[39m 
E           #x1B[32m----> #x1B[39m#x1B[32m3#x1B[39m #x1B[38;5;28;01mimport#x1B[39;00m easyimaging.measurement.measurement
E           #x1B[32m      4#x1B[39m 
E           #x1B[32m      5#x1B[39m easyimaging.measurement.measurement._is_notebook = #x1B[38;5;28;01mlambda#x1B[39;00m : #x1B[38;5;28;01mTrue#x1B[39;00m
E           
E           #x1B[31mModuleNotFoundError#x1B[39m: No module named 'easyimaging'

.tox/codeshelf-odin/lib/python3.12/site-packages/nbclient/client.py:918: CellExecutionError